GSEA (Gene Set Enrichment Analysis) — Glossary

GSEA (Gene Set Enrichment Analysis)

Analysis Method

gsea

Definition

Ranked-list pathway method: instead of a cutoff, it tests whether pathway genes concentrate at the top or bottom of the full ranked feature list. Reports ES, NES, and FDR.

Examples

GSEA on all features ranked by importance.

Related terms

Pathway Enrichment Enrichment Score Normalised Enrichment Score (NES) Over-Representation Analysis (ORA)

All terms