Result Information
Result ID
143
Type
Random Forest
Status
completed
Dataset ID
697
Created
2026-09-21 02:13:52.593069
Saved Model
Available — Download .pkl
Model Parameters
Model Type
regression
Estimators
60
Max Depth
None
Pre-Modeling Statistics (Pearson, Spearman, ANOVA) Help
Feature Pearson r Pearson p Pearson FDR Spearman ρ Spearman FDR ANOVA F ANOVA FDR Significant?
MEAN_PC_SHOOTMASS 0.7414 0.0058 0.0550 0.5263 0.5670 12.2050 0.0550 ✗ No
MEAN_RC_SHOOTMASS 0.5022 0.0962 0.3327 0.4000 0.5670 3.3721 0.3327 ✗ No
MEAN_PC_HEIGHT 0.5215 0.0821 0.3327 0.3544 0.5670 3.7351 0.3327 ✗ No
MEAN_ENV_SOILOC 0.1793 0.5771 0.9621 0.3474 0.5670 0.3322 0.9621 ✗ No
MEAN_ENV_SOILMOIS 0.1431 0.6572 0.9621 0.1860 0.9721 0.2091 0.9621 ✗ No
MEAN_ENV_SOILTN 0.2084 0.5157 0.9621 0.3544 0.5670 0.4540 0.9621 ✗ No
MEAN_COVER_TOTAL_JUL 0.5775 0.0492 0.3119 0.3965 0.5670 5.0047 0.3119 ✗ No
MEAN_COVER_SHANNON_JUL -0.0670 0.8360 0.9621 -0.0947 0.9927 0.0451 0.9621 ✗ No
MEAN_PC_WOODMASS -0.4277 0.1654 0.4490 -0.3509 0.5670 2.2393 0.4490 ✗ No
PLOT_COUNT -0.0412 0.8988 0.9621 -0.0242 0.9927 0.0170 0.9621 ✗ No
PASTURE_TOTALAREA -0.0154 0.9621 0.9621 0.0386 0.9927 0.0024 0.9621 ✗ No
PASTURE_FORESTAREA 0.1155 0.7208 0.9621 0.0386 0.9927 0.1352 0.9621 ✗ No
PASTURE_WETLANDAREA 0.0861 0.7901 0.9621 0.0772 0.9927 0.0747 0.9621 ✗ No
MEAN_ENV_PH -0.4910 0.1051 0.3327 -0.3684 0.5670 3.1760 0.3327 ✗ No
MEAN_ENV_SOILP 0.0278 0.9318 0.9621 0.0000 1.0000 0.0077 0.9621 ✗ No
PASTURE_BIOMASS_PREDICTED -0.2480 0.4371 0.9228 -0.1544 0.9927 0.6551 0.9228 ✗ No
PASTURE_HA -0.2723 0.3919 0.9228 -0.3123 0.6138 0.8009 0.9228 ✗ No
CF_NUMBER 0.9959 0.0000 0.0000 0.9930 0.0000 1224.9963 0.0000 ✓ Yes
SR_NUMBER 0.0723 0.8234 0.9621 0.0782 0.9927 0.0525 0.9621 ✗ No
Feature Importance (Random Forest) Help
Rank Feature Importance (Mean) SD
1 CF_NUMBER 0.2971 0.0042
2 MEAN_ENV_PH 0.0975 0.0073
3 MEAN_PC_SHOOTMASS 0.0772 0.0032
4 MEAN_COVER_SHANNON_JUL 0.0744 0.0057
5 MEAN_COVER_TOTAL_JUL 0.0602 0.0098
6 MEAN_ENV_SOILTN 0.0440 0.0001
7 PASTURE_FORESTAREA 0.0424 0.0100
8 MEAN_ENV_SOILMOIS 0.0421 0.0232
9 MEAN_PC_WOODMASS 0.0420 0.0006
10 PASTURE_WETLANDAREA 0.0397 0.0046
11 PASTURE_HA 0.0387 0.0233
12 SR_NUMBER 0.0367 0.0038
13 MEAN_RC_SHOOTMASS 0.0322 0.0176
14 MEAN_ENV_SOILOC 0.0250 0.0069
15 PASTURE_TOTALAREA 0.0156 0.0121
16 PASTURE_BIOMASS_PREDICTED 0.0124 0.0023
17 MEAN_PC_HEIGHT 0.0100 0.0062
18 PLOT_COUNT 0.0067 0.0064
19 MEAN_ENV_SOILP 0.0060 0.0016
Permutation Importance Help
Rank Feature Perm. Importance (Mean) SD
1 CF_NUMBER 0.3776 0.2402
2 MEAN_ENV_SOILTN 0.3282 0.0149
3 PASTURE_HA 0.2403 0.1183
4 MEAN_ENV_SOILOC 0.1988 0.0757
5 MEAN_COVER_TOTAL_JUL 0.1326 0.0675
6 MEAN_RC_SHOOTMASS 0.1305 0.1049
7 MEAN_ENV_SOILMOIS 0.0882 0.1146
8 MEAN_PC_SHOOTMASS 0.0848 0.0056
9 MEAN_ENV_SOILP 0.0598 0.0180
10 MEAN_PC_HEIGHT 0.0261 0.0197
11 PASTURE_BIOMASS_PREDICTED 0.0137 0.0000
12 SR_NUMBER 0.0041 0.0068
13 MEAN_ENV_PH -0.0044 0.0015
14 PASTURE_FORESTAREA -0.0196 0.0233
15 MEAN_COVER_SHANNON_JUL -0.0279 0.0316
16 PASTURE_TOTALAREA -0.0378 0.0538
17 PLOT_COUNT -0.0490 0.0555
18 MEAN_PC_WOODMASS -0.0560 0.0252
19 PASTURE_WETLANDAREA -0.1805 0.1198
SHAP Feature Importance Help
Rank Feature SHAP Mean |Abs|
1 CF_NUMBER 1.5668
2 MEAN_ENV_PH 0.5475
3 PASTURE_FORESTAREA 0.3528
4 MEAN_ENV_SOILTN 0.3429
5 MEAN_RC_SHOOTMASS 0.3050
6 MEAN_PC_SHOOTMASS 0.2653
7 MEAN_PC_WOODMASS 0.2287
8 MEAN_ENV_SOILMOIS 0.2250
9 MEAN_COVER_TOTAL_JUL 0.1733
10 PASTURE_WETLANDAREA 0.1630
11 PASTURE_HA 0.1630
12 MEAN_PC_HEIGHT 0.1122
13 SR_NUMBER 0.1109
14 MEAN_ENV_SOILOC 0.1089
15 PASTURE_BIOMASS_PREDICTED 0.0998
16 MEAN_COVER_SHANNON_JUL 0.0854
17 MEAN_ENV_SOILP 0.0696
18 PASTURE_TOTALAREA 0.0581
19 PLOT_COUNT 0.0100
Model Metrics
Split R² MSE
Split 1 -0.0791 7.4336
Split 2 -0.0193 7.0220
Mean -0.0492 7.2278
Figures
Feature importance Download PNG
Feature importance
Permutation importance Download PNG
Permutation importance
SHAP summary Download PNG
SHAP summary
Observed vs predicted (out-of-fold) Download PNG
Observed vs predicted (out-of-fold)
Cross-validation score distribution Download PNG
Cross-validation score distribution
Pathway Analysis (same dataset) Help

Method & Provenance

Method
Random Forest (Regression)
Method key
random_forest (result type: random_forest, result #143)
Engine
Python · scikit-learn v1.8.0
Dataset(s)
#697 gallery — catg_example_02_grazing_carrying_capacity.csv
Status
completed
Permanent link
https://cat-g-omxpert.wishartlab.com/results/by-token/c2f085d2764a43e3b8a578284d15edb5 Bookmark or share this URL — it does not depend on your session.
Created
2026-09-21 02:13:52.593069

Parameters used

ParameterValue
task_type regression
model_type regression
target_column CW_NUMBER
n_estimators 60
n_splits 2
test_size 0.25
run_univariate True
run_permutation True
run_shap True
permutation_repeats 10
fdr_threshold 0.05

Execution trace

Reconstructed from the parameters stored with this result — represents the Python/R calls the analysis service made.

from sklearn.ensemble import RandomForestRegressor
model = RandomForestRegressor(n_estimators=60, random_state=42)
scores = sklearn.model_selection.cross_val_score(model, X, y, cv=2)