Multi-Omics Analysis Configuration

Select at least two datasets and run a multi-omics integration method.

Hold Cmd/Ctrl to select multiple datasets.
Applies to PCA, SNF, MOFA+, CCA and NMF runs: each data block is imputed before integration. Missing values left in place abort the run with a clear message.
Learn more: PCA · SNF · MOFA+ · MOFA2 · DIABLO · CCA · NMF
Transposed layout requires an explicit feature-ID column — this is never auto-detected.
Required for DIABLO. Lists categorical columns with class counts.
DIABLO Parameters
Currently applies the same keepX to all blocks. Per-block keepX is a known limitation.
MOFA2 Parameters