Ecology Result #61 — Analysis Report
Contents
- alpha diversity (#61) completed
1. Alpha Diversity
2026-09-21 02:17:26 · ecology
Alpha-diversity analysis of 60 samples found a mean Shannon index of 2.95.
| n_rows | 60 |
|---|---|
| derived_dataset_id | 716 |
| group_col | community |
indices
| richness | shannon | simpson | evenness |
|---|---|---|---|
| 27 | 3.033082 | 0.942367 | 0.920277 |
| 26 | 2.909643 | 0.934102 | 0.89305 |
| 27 | 2.935465 | 0.935769 | 0.890658 |
| 27 | 2.957406 | 0.936869 | 0.897316 |
| 27 | 3.03298 | 0.942592 | 0.920246 |
| 26 | 2.99914 | 0.940032 | 0.920519 |
| 25 | 2.90515 | 0.934618 | 0.902536 |
| 25 | 2.839696 | 0.929321 | 0.882201 |
| 27 | 2.947885 | 0.936538 | 0.894427 |
| 26 | 2.962414 | 0.938766 | 0.909247 |
alpha index boxplot
Method & Provenance
- Method
- Ecology — Alpha Diversity
- Engine
- Python · numpy/scipy 1.17.1
- Input dataset
- gallery — example_community_matrix.csv
- Started
- 2026-09-21 02:17:26.280202
- Permanent link
- https://cat-g-omxpert.wishartlab.com/results/by-token/98ddb301a65940c0adea62e26e8779f3
| Parameter | Value |
|---|---|
| analysis_kind | alpha_diversity |
| group_col | community |
Command history
# python # Alpha Diversity via app.services.ecology_service # python # diversity indices / distance matrix on community matrix